Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015856680.1_cds_XP_016513210.1_25773
CDS Infomation

[gene=LOC107830227] [db_xref=GeneID:107830227] [protein=histone deacetylase 6-like] [protein_id=XP_016513210.1] [location=complement(join(14654..14725,14857..14947,15609..15751,15863..16303,17070..17627))] [gbkey=CDS]
Sequence

ATGGATTCTTCCATTTCCACCGTGGAGGGCGGCGCGTCGCTTCCTTCGACGGGGACTGAT
GCGACAAAGCGCCGTGTTACTTATTTCTACGACCCTTACATCGGCGACTATTACTACGGT
CTGGGCCATCCAATGAAGCCACACCGTATTCGCATTACCCAAAATCTTGTTTGTCACTAC
AACCTTCATCGCCGAATGGAGATCACTCGCCCGTTCCCGGCGAGTGCGGACGATATTCGT
TGGTTCCACTCGCCGGACTACGTCGACTTTCTCTCTTCCGTTTCACCGGAGAGTCTTTAC
TACCAGACACATGACGACCACGACCTTAAACGCTTCAACCTCAGAGAAGATTGCCCAGTT
TTTGATGGACTTTTTGGTTTTTGTCAAGCTTCTGCCGGTGGTTCCATTGGCGCCGCCGTT
AAGCTTAATAGACAAGATGCTGACATAGCTATCAATTGGGCTGGGGGATTGCACCATGCA
AAGAGAACCGGGGCTTCCGGATTTTGCTATGTTAATGATATTGTTCTTGGAATTCTTGAA
CTTCTCAAGGTCCACAAGCGTGTGTTGTATATAGATATCGATGTTCACCACGGAGACGGA
GTTGAGGAGGCTTTTTATACCACGGATCGGGTTATGACAGTGTCTTTTCATAAGTTTGGG
GACTTCTTTCCTGGTACAGGACATATAAAAGACATTGGTGCAGGTTCTGGGAAGTACTAT
GCCTTAAACGCTCCTTTGAATGATGGGATTGATGATGAAAGTTTTCGTCGTCTATTCCGT
CCCATAATCCAAAAAGTAATGGAGGTCTATCAACCTGAAGCCGTGGTTCTTCAATGTGGT
GCTGATTCACTAGCTGGAGACAGGTTGGGCCTTTTCAACTTGTCTGTCAAAGGCCATGCC
GATTGCCTTCGATTCCTCAGGTCTTTCAATGTTCCTCTAATGGTATTGGGTGGTGGAGGT
TATACAATTCGGAATGTTGCCCGCTGCTGGGCCTATGAGACAGCAGTTGCAGTTGGAGTA
GAGCTTGAGAATAAATTGCCTTACAATGACTATTACGAGTATTTCGGCCCAGATTATACT
CTTCATGTTGAACCAATACCCATGGAGAATAAGAATTTGCCCCGGGATTTGGAGAAGATC
AGGAACATGTTGCTGGAGCAACTTTTGCGATTACCCCATGCACCTAGTGTTCCATTCCAA
ATGGCACCTTCTATTACAGAAGTTCCTGAAGAGAGAGAGGAAGACATAGATCAAAGGCCA
AAACCACGGCTATGGATTAAAGAGGAATACGAGTCTTATTGCTGA

Peptide Sequence

PEP ID

XP_016513210.1
PEP Infomation

PREDICTED: histone deacetylase 6-like [Nicotiana tabacum]
Sequence

MDSSISTVEGGASLPSTGTDATKRRVTYFYDPYIGDYYYGLGHPMKPHRIRITQNLVCHY
NLHRRMEITRPFPASADDIRWFHSPDYVDFLSSVSPESLYYQTHDDHDLKRFNLREDCPV
FDGLFGFCQASAGGSIGAAVKLNRQDADIAINWAGGLHHAKRTGASGFCYVNDIVLGILE
LLKVHKRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDIGAGSGKYY
ALNAPLNDGIDDESFRRLFRPIIQKVMEVYQPEAVVLQCGADSLAGDRLGLFNLSVKGHA
DCLRFLRSFNVPLMVLGGGGYTIRNVARCWAYETAVAVGVELENKLPYNDYYEYFGPDYT
LHVEPIPMENKNLPRDLEKIRNMLLEQLLRLPHAPSVPFQMAPSITEVPEEREEDIDQRP
KPRLWIKEEYESYC

Transcript Sequence

Gene sequence data has not been registered.